Options include:
Hyperlinks - All hyperlinks can be carried over to the new PDF file, or they can be omitted.
Bookmarks - PDF Outline bookmarks can be created according to the logical structure of the original document.
Document Information - Document Summary details in the original document can be used for the Document Information in the new PDF file.
PDF Creation From Word dialog screen. Click to view full size image.

Solid Converter PDF v6 and Solid PDF Tools v6 also include these same options for creating structured PDF documents.